BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A04SP1|AL426767
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig276 1285 0.0
>3x_Contig276
Length = 1075
Score = 1285 bits (646), Expect = 0.0
Identities = 661/668 (98%)
Strand = Plus / Minus
Query: 1 agcataagattgcctcgtaattgacgagtatccactgtgtttccactgtcgtccgccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agcataagattgcctcgtaattgacgagtatccactgtgtttccactgtcgtccgccagc 609
Query: 61 aaaaagaaattcttttctactttgaaatttttcagctcttcgaaatatgttaaaacctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaaaagaaattcttttctactttgaaatttttcagctcttcgaaatatgttaaaacctgc 549
Query: 121 gatgagatgagatgagatgagatgagacttgatatttacagaacacctgttcaagtagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gatgagatgagatgagatgagatgagacttgatatttacagaacacctgttcaagtagat 489
Query: 181 gtttcagtactgttttccgtgataagttcaccggaacagctaagatatctatwatccagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 488 gtttcagtactgttttccgtgataagttcaccggaacagctaagatatctataatccagt 429
Query: 241 gcagttaatatacctttttccattaatcaaaagagatggtgagagttagawagagaactt 300
||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 428 gcagtaaatatacctttttccattaatcaaaagagatggtgagagtaagaaagagaactt 369
Query: 301 ccaagagaacttccactcgtatgaaggagggtatcaagaagaaggctgctgctcaacata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ccaagagaacttccactcgtatgaaggagggtatcaagaagaaggctgctgctcaacata 309
Query: 361 ggaaagagcggaaacttgctaagaaggatgtgacatggaaatccaataagagttaggwtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 308 ggaaagagcggaaacttgctaagaaggatgtgacatggaaatccaataagagtaaggatc 249
Query: 421 caggtattccggccaatttcccgtacaagaacaggatcatcgaagagattgaagcgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 caggtattccggccaatttcccgtacaagaacaggatcatcgaagagattgaagcgaaga 189
Query: 481 gaagaactgatttggaggagaaagaacgtagaaagcaggaaaggttagaggctaagagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaagaactgatttggaggagaaagaacgtagaaagcaggaaaggttagaggctaagagaa 129
Query: 541 gaactcgtgaactaggtgaagatgttggtgatgacgatgaatctatggatgaagatgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gaactcgtgaactaggtgaagatgttggtgatgacgatgaatctatggatgaagatgaaa 69
Query: 601 acgacggcaacaatggtctttctgctttgttagaatccgctcagcaagctgcaaaggagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acgacggcaacaatggtctttctgctttgttagaatccgctcagcaagctgcaaaggagt 9
Query: 661 tcaatggg 668
|||||||
Sbjct: 8 acaatggg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9325
Number of Sequences: 1807
Number of extensions: 9325
Number of successful extensions: 682
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)